Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI0834RTNI
IGVFFI0834RTNI
released
validated
Json view
File Set
IGVFDS9866LFTQ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3831
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3831_R1
md5sum
d1f0e90d0f59d2a24232f339cff5ef67
Content MD5sum
bc3ee4dc41a02f8dfa3c27a8b286aaf8
File Size
570 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1535_L2_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3831
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
11797501
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2764HFQD
yaml
seqspec
seqspec of IGVFFI0834RTNI, IGVFFI9814XYUH
Jason Buenrostro, Broad
1.3 KB
validated