Home

IGVFFI0821AVRA

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1183UPFU(single-nucleus ATAC-seq (10x multiome))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X043_G7_P043_L005_I1
md5sum
10927fdb039829e59789ef937ef743ed
Content MD5sum
5f4ee2d13752350f5392b9b33ca707d7
File Size
547 MB
Submitted File Name
Multiome_ATAC_X043_G7_L007_P043_S33_L005_I1_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
223JJTLT3
Lane
5
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
I1
Average Read Length
8
Read Count
74197942

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 79 years) cerebellar cortex tissue associated with Alzheimer disease, Parkinson's disease; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF