IGVFFI0814OELU

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9444MPCG(CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

jesse-engreitz:Jurkat_Stim-IL2RA_prom-BioRep2-FFRep1-BinA-PCRRep2_R1

md5sum

4a3f312aba9f9c294be3b62311c7bfcd

Content MD5sum

6a5e7526e02a2e1f2a001416b9ee5822

File Size

5.9 MB

Submitted File Name

Jurkat_Stim-IL2RA_prom-BioRep2-FFRep1-PCRRep2-BinA_S37_R1_001.fastq.gz

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Illumina Read Type

Index

TGCTCGAC:TTGT

Average Read Length

150

Read Count

200427

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM7312DZBH

InVitroSystem

Jurkat

Jurkat cell line, male, Homo sapiens (sorting details: FACS bin for 0-25% expression of IL2RA) treated with 100 ng/mL phorbol 13-acetate 12-myristate for 24 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 24 hours, modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library