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INDEXED
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SequenceFile
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IGVFFI0813DWGL
IGVFFI0813DWGL
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8311GMRY
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_X004_G1_P004_L001_R2
md5sum
291ad2fa847e89108fd25fb1bac02146
Content MD5sum
5cd8114b6fc756cb1ef2c414843857cf
File Size
8.4 GB
Submitted File Name
Multiome_RNA_PD_16-14_CING_X004_S01_L001_B1_T1_P004_S1_L001_R2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H5TLFDSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
101
Read Count
151334422
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM7491SDBL
Tissue
posterior cingulate gyrus
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
Homo sapiens (male, 80 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment