Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI0783JHHG
IGVFFI0783JHHG
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8751LXWJ
(CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
gary-hon:LW433_5_R1
md5sum
bf4f002f5f6199b372eeafb36c3d666f
Content MD5sum
25867882f8fdbbf8c5cd5e592a36c2fc
File Size
39 GB
Submitted File Name
/project/GCRB/Hon_lab/shared/data/sequencing_data/2024/2024-05-01-Novogene-NovaSeq.Hon17_18/scRNA//LW433_S2_L005_R1_001.fastq.gz
Sequencing Details
Sequencing Platform
Illumina NovaSeq X Plus
Sequencing Run
1
Flowcell ID
227C7WLT4
Lane
5
Sequencing Kit
NovaSeq X Series 25B Reagent Kit
Illumina Read Type
R1
Average Read Length
151
Read Count
533798074
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1513DHGW
InVitroSystem
H9
H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW433), female, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library
Attribution
Award
HG011996
Principal Investigator(s)
Bruce Posner
,
Gary Hon
,
William Kraus
,
Nikhil Munshi
,
Maria Chahrour
Contact P.I.
Gary Hon
Lab
Gary Hon, UT