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INDEXED
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SequenceFile
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IGVFFI0776VMAP
IGVFFI0776VMAP
released
validated
Json view
File Set
IGVFDS7100QYTS
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 7398
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7398_R2
md5sum
f4518fe444a79e3f49bad6ce3af5298e
Content MD5sum
0daa3680431f6f5f6acbac3e97b94551
File Size
12 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1957_L7_SS-PKR-502_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
7398
Flowcell ID
22KFLYLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
162831147
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6459ANYG
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 502)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4350KRJU
yaml
seqspec
seqspec of IGVFFI4318DMNZ, IGVFFI0776VMAP
Jason Buenrostro, Broad
1.3 KB
validated