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SequenceFile
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IGVFFI0773QGYK
IGVFFI0773QGYK
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8707VRYD
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_X044_G2_P044_L005_R2
md5sum
f137aa394cf59364372f3f71d6241b06
Content MD5sum
3dc6b2495a646dab74982d9a5e27f5ff
File Size
2.6 GB
Submitted File Name
Multiome_RNA_X044_G2_L002_P044_S36_L005_R2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
222YMLLT3
Lane
5
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
90
Read Count
61060466
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM6240XBPL
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; Homo sapiens (male, 85 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples