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INDEXED
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SequenceFile
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IGVFFI0766DFFZ
IGVFFI0766DFFZ
released
validated
Json view
File Set
IGVFDS6235OWZP
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8583
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8583_R1
md5sum
f55e53d9a543ec1849a705059ae46c73
Content MD5sum
ba3dd21c4c73f0dc15dea83c9487c439
File Size
696 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2317_L2_SS-PKR-183_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8583
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
15660040
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2203VYXT
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 183)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3688UPPG
yaml
seqspec
seqspec of IGVFFI0766DFFZ, IGVFFI1839AETU, IGVFFI4354DCSN
Jason Buenrostro, Broad
1.3 KB
validated