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INDEXED
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SequenceFile
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IGVFFI0735XDYL
IGVFFI0735XDYL
released
validated
Json view
File Set
IGVFDS2689YHSU
(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 7
File Format
fastq
Content Type
reads
md5sum
d70625e8884f07fa1fe17c627a9c6db8
Content MD5sum
b5721572dd282cbb103657c4ed8e6f0b
File Size
10 GB
Submitted File Name
igvf_010/nova2/igvf_010_B15_D_nova_N2_L003_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7
Flowcell ID
H7YTNDSX7
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
143392216
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4001TDPF
MultiplexedSample
gastrocnemius
,
kidney
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6422HBLC
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.4 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6105BSTU
yaml
seqspec
seqspec of IGVFFI0065PXLH, IGVFFI0735XDYL
Ali Mortazavi, UCI
1.4 KB
validated