IGVFFI0718VZBA

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9599ZHWG(single-nucleus ATAC-seq (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP014_G1_P061_L001_I1

md5sum

0930c6c3d211954a1a980f1c2781ffac

Content MD5sum

1a0e3fee6c2892d55cd939f41796ac5c

File Size

62 MB

Submitted File Name

Multiome_ATAC_RP014_G1_L001_P061_S9_L001_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

2257VGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

7638118

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3192MEUT

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples