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INDEXED
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SequenceFile
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IGVFFI0710FCLU
IGVFFI0710FCLU
released
validated
Json view
File Set
IGVFDS4174PVSF
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8389
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8389_R1
md5sum
06993801eab3d41df466035258c49c9c
Content MD5sum
b5bb371e8b643433dcd1db086ce95039
File Size
3.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2249_L6_SS-PKR-602_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8389
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
95869925
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1137TONP
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 602)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4546PTOK
yaml
seqspec
seqspec of IGVFFI0710FCLU, IGVFFI2467ELBY
Jason Buenrostro, Broad
1.3 KB
validated