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INDEXED
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SequenceFile
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IGVFFI0707UFPZ
IGVFFI0707UFPZ
released
validated
Json view
File Set
IGVFDS3977WBMS
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 5380
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5380_R2
md5sum
b20cb3ed44128b644db1f419a9b57650
Content MD5sum
88cdba8276e2ba170195f7b676df04a3
File Size
15 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1589_L5_SS-PKR-433_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5380
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
198535063
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2598WSHP
yaml
seqspec
seqspec of IGVFFI4877DKZW, IGVFFI0707UFPZ
Jason Buenrostro, Broad
1.3 KB
validated