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INDEXED
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SequenceFile
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IGVFFI0696CFSU
IGVFFI0696CFSU
released
validated
Json view
File Set
IGVFDS8262FLXH
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 8404
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8404_R2
md5sum
d20eff2da1b262ae60d18fc54d0fa7e2
Content MD5sum
16d44eca1f4ade865ac87fd7f5fd8597
File Size
7.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2244_L1_SS-PKR-604_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8404
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
100301790
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6880XEAH
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 604)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8924SHPQ
yaml
seqspec
seqspec of IGVFFI6384SINX, IGVFFI0696CFSU
Jason Buenrostro, Broad
1.3 KB
validated