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INDEXED
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SequenceFile
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IGVFFI0689IXAH
IGVFFI0689IXAH
released
validated
Json view
File Set
IGVFDS0378JGOP
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 7
File Format
fastq
Content Type
reads
md5sum
f276027b214f4fbf85a789e37b6e80e4
Content MD5sum
5da6e8a69db445468de384304e288261
File Size
6.3 GB
Submitted File Name
igvf_010/nova1/igvf_010_B13_D_nova_N1_L003_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7
Flowcell ID
H7TLWDSX7
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
181480321
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9503ZUAX
MultiplexedSample
gastrocnemius
,
kidney
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1265JCEM
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.7 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3629RUQX
yaml
seqspec
seqspec of IGVFFI4632FUDJ, IGVFFI0689IXAH
Ali Mortazavi, UCI
1.4 KB
validated