IGVFFI0688UTKC

{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI0688UTKC/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI0688UTKC",
    "aliases": [
        "jesse-engreitz:230523pPPIFEnformer-THP1-Amp_PPIF_promoter-BioRep2-FFrep2-BinA-PCRrep3_R2"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released sequence file [IGVFFI0688UTKC](/sequence-files/IGVFFI0688UTKC/) has in progress subobject auxiliary set [IGVFDS1895YQOO](/auxiliary-sets/IGVFDS1895YQOO/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/sequence-files/IGVFFI0688UTKC/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "4ebc4099f84d28ae5f901728160ba842",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2023-12-13T10:08:32.705143+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS1895YQOO/",
    "file_size": 12010303,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI0688UTKC/@@download/IGVFFI0688UTKC.fastq.gz",
    "illumina_read_type": "R2",
    "index": "TGTCGGAT:ACTG",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 150,
    "md5sum": "c2e2e83727b5808c8c6e45ef3cab511f",
    "mean_read_length": 150,
    "minimum_read_length": 150,
    "read_count": 252718,
    "release_timestamp": "2023-12-21T00:48:42.410908+00:00",
    "s3_uri": "s3://igvf-files/2023/12/13/6cb66e1e-b7ad-449d-9f2b-ae32ed6dca81/IGVFFI0688UTKC.fastq.gz",
    "schema_version": "14",
    "seqspecs": [],
    "sequencing_platform": "/platform-terms/EFO_0008566/",
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
        "title": "Michael Montgomery"
    },
    "submitted_file_name": "230523pPPIFEnformerTHP1-THP1-PE-pPPIF_Enformer-Amp-pPPIF-BioRep2-FFRep2_BinA-PCRrep3_S243_R2_001.fastq.gz",
    "summary": "R2 reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "6cb66e1e-b7ad-449d-9f2b-ae32ed6dca81"
}