IGVFFI0672YNGL

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6915EFKE(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP013_G4_P062_L005_I1

md5sum

8d6651cc1e8376677bf24533cb99c394

Content MD5sum

70be9fffff8ff2b3b9d9ac19161b523c

File Size

483 MB

Submitted File Name

Multiome_RNA_RP013_G4_L004_P062_S24_L005_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

78747245

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1576QCMO

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 14 more samples