IGVFFI0668CNKN

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4024PLUG(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP001_G2_P052_L002_R2

md5sum

cd3e56a19be62b34163b663db56f7999

Content MD5sum

91b9245674606e34aa2be98d923ec480

File Size

1.7 GB

Submitted File Name

Multiome_RNA_RP001_G2_L002_P052_S2_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

40781356

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7915KUKE

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples