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IGVFFI0666JVDJ

released
validated
File Set
IGVFDS0222OXIK(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_mouse_bridge_116_rna_r1
md5sum
9abba056b468c9573e6a0b5f99b5cdf5
Content MD5sum
27aed3a302f6c942122ce788b4ec7ef4
File Size
8.4 GB
Submitted File Name
/oak/stanford/projects/igvf/Projects/230622_IGVF_Bridge_McGinnis/GEX/RNA_116_S7_L004_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
HW2WLDSX5
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
28
Read Count
409968372

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
left cerebral cortex tissue, female, Mus musculus C57BL/6J (10 weeks)

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0365KTIZ, IGVFFI0666JVDJ, IGVFFI8523UBIS, IGVFFI5154UDRD
Ansuman Satpathy, Stanford
1.4 KB
validated

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford