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IGVFFI0663MEAF

released
validated
File Set
IGVFDS7332VBBE(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1600
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1600_R1
buenrostro-bernstein:SS-LS_1600_R1
md5sum
6bf2cfe8769cc8c8ae2b5bcd58c454e7
Content MD5sum
3264253fe6fad9efc13d0f0b311909a6
File Size
742 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1097_L3_SS-PKR-3_SS-V2-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1600
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
35921638

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (29 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad