IGVFFI0656LSMN

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1028AELE(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP010_G6_P060_L005_R1

md5sum

a01366cf26e0d1c0a8d76ca8b3a9dd58

Content MD5sum

d4e585b765d2ff1ea2f06260e01309fc

File Size

1.5 GB

Submitted File Name

Multiome_RNA_RP010_G6_L006_P060_S45_L005_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

74319458

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2055PXMF

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) putamen tissue associated with Parkinson's disease, mild cognitive impairment; ... and 12 more samples