IGVFFI0646IKGG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5032QIJK(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X014_G4_P014_L002_R1

md5sum

898a8dbb1fba4fdce779ef64e0ae8631

Content MD5sum

6ac046fa912a3f3d23f5891e786fded1

File Size

5.5 GB

Submitted File Name

Multiome_RNA_X014_G4_L004_P014_S16_L002_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HTHCCDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

258406944

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3399SGBD

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples