IGVFFI0632QRJZ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3912RWNQ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP002_G1_P052_L003_I2

md5sum

fc233f14846d42dc89359a3493507a05

Content MD5sum

f0bd1c9b7cf04715b6616b57ce1b557f

File Size

246 MB

Submitted File Name

Multiome_RNA_RP002_G1_L001_P052_S9_L003_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

45205149

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2125NOYE

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples