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INDEXED
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SequenceFile
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IGVFFI0626OXKG
IGVFFI0626OXKG
released
validated
Json view
File Set
IGVFDS2816WTSD
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 4270
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4270_R1
md5sum
efec30a5f4c2a61353ab12fb31694c93
Content MD5sum
3b37b5b577d70e33d4a8fdcd30b80abe
File Size
2.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-527_L4_SS-PKR-172_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4270
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
36675367
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5762CPQM
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 172)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5373VZJE
yaml
seqspec
seqspec of IGVFFI0626OXKG, IGVFFI4068NZVB, IGVFFI9490YRIB
Jason Buenrostro, Broad
1.4 KB
validated