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IGVFFI0623ATSQ

released
validated
File Set
IGVFDS6298OKGJ(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-dss05_prim_5k_ATAC.R1.fastq.gz
md5sum
286bf052d6a8beb62a8b6a2e41b5a545
Content MD5sum
1ff7953d9bb9acfb8370183ef2160b8e
File Size
2.0 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/dss05_prim_5k_ATAC.R1.fastq.gz
Checkfiles Version
v14
Submitter Comment
DSS05-prim-5k_P1.59
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
49.53
Read Count
59413292

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Mus musculus C57BL/6J colon cell

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.9 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0623ATSQ, IGVFFI4523ADEB, IGVFFI3191SJVL
Jason Buenrostro, Broad
1.2 KB
validated