IGVFFI0614AOFC

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8662BJYJ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP010_G8_P060_L007_I2

md5sum

52f579e82a41b8a383a4a8a83c93c6dc

Content MD5sum

07d20ed51edaf8cf0f9743d047e41caf

File Size

478 MB

Submitted File Name

Multiome_RNA_RP010_G8_L008_P060_S43_L007_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

84632472

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6509YCTF

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) putamen tissue associated with Parkinson's disease, mild cognitive impairment; ... and 12 more samples