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INDEXED
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SequenceFile
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IGVFFI0604WSEA
IGVFFI0604WSEA
released
validated
Json view
File Set
IGVFDS0580JTOM
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 3899
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3899_R1
md5sum
acd9a11bb2efbdf61ae6cbb1557b85b7
Content MD5sum
2b1b330cb10d735649dba742fbd7e4f2
File Size
1.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-771_L5_SS-PKR-172_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3899
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
25599881
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5762CPQM
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 172)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0865KWQF
yaml
seqspec
seqspec of IGVFFI0604WSEA, IGVFFI6148XPRO, IGVFFI6571FFWK
Jason Buenrostro, Broad
1.3 KB
validated