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INDEXED
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SequenceFile
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IGVFFI0600SJEA
IGVFFI0600SJEA
released
validated
Json view
File Set
IGVFDS2064XDWX
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 986
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_986_R1
md5sum
5b45943cab509e72968953ac2d1437e1
Content MD5sum
68503541fa046bdba547f0f98d5c0727
File Size
1.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-957_L2_SS-PKR-183_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
986
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
26277610
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8154CBUO
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 183)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4991MERH
yaml
seqspec
seqspec of IGVFFI0600SJEA, IGVFFI8347YTFA, IGVFFI4042QSTK
Jason Buenrostro, Broad
1.3 KB
validated