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INDEXED
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SequenceFile
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IGVFFI0596FTXK
IGVFFI0596FTXK
released
validated
Json view
File Set
IGVFDS4653HFNR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 5371
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5371_R1
md5sum
d7f955de10e3b5aac113186c0623d23f
Content MD5sum
bc0c7c6b6d91484dc407d0d1203b611a
File Size
7.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1576_L3_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5371
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
168075732
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5344RQUC
yaml
seqspec
seqspec of IGVFFI0596FTXK, IGVFFI7053KGZB
Jason Buenrostro, Broad
1.3 KB
validated