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INDEXED
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SequenceFile
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IGVFFI0588PKJJ
IGVFFI0588PKJJ
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validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7435GWZK
(single-nucleus ATAC-seq (10x multiome))
Summary
R2 reads from sequencing run 255
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX16-SC4_snATAC_S2_R2
md5sum
6893b9c754c1af4d4ce5711f69f87757
Content MD5sum
ecf50bd64123fe0c1e446befe292f736
File Size
4.6 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX16-SC4/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX16-SC4-ATAC_S11_L003_R2_001.fastq.gz
Checkfiles Version
v17
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
255
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
24
Read Count
276102940
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM7234OUBC
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF