IGVFFI0582CFXV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2903AZNH(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP001_G7_P052_L002_I2

md5sum

5ea49bcc2adb0be8374294621589aec8

Content MD5sum

7a1b73cf6169a6db57a70559e6ffcf7d

File Size

213 MB

Submitted File Name

Multiome_RNA_RP001_G7_L007_P052_S7_L002_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

33410615

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8255WJLC

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples