IGVFFI0573DXNN

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2614JDXX(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X048_G5_P050_L002_I1

md5sum

3e2dc7d2694e77a4a1faf43cf8d8ff07

Content MD5sum

8248d8ee8dbac6303a28169bbd2ad541

File Size

2.3 GB

Submitted File Name

Multiome_RNA_X048_G5_L005_P050_S21_L002_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H7VW3DSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

356157250

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6138EUGH

MultiplexedSample

posterior cingulate gyrus, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 93 years) substantia nigra tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples