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INDEXED
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SequenceFile
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IGVFFI0570YVWS
IGVFFI0570YVWS
released
validated
Json view
File Set
IGVFDS6385JXFZ
(untransfected prime editing Variant-EFFECTS)
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:220228_8merInsertion-THP1-Amp_PPIF_promoter-THP1-PE2_Exp3_NegControl-PCRrep1_I1
md5sum
785af399ecb51c0b4370a2cd2c00a548
Content MD5sum
a60f72f19378c68c3949389e538309ce
File Size
15 MB
Submitted File Name
220228pPPIF-FFSample-1-DNA-pPPIF-Amp-pPPIF-1-1-1-BinNeg_I1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jesse Engreitz, Stanford
(
HG011972
—
Jesse Engreitz
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 550
Sequencing Run
1
Illumina Read Type
I1
Index
GCAGCCGT:TGAC
Average Read Length
8
Read Count
1913659
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2216EFEX
InVitroSystem
THP-1
Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)