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SequenceFile
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IGVFFI0561XZDW
IGVFFI0561XZDW
released
validated
Json view
File Set
IGVFDS8664VJYP
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8723
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8723_R1
md5sum
5cbd7a7baee97e4099f76d913758226e
Content MD5sum
5b53387419899970a0ca4c3c61812c47
File Size
2.6 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2265_L4_SS-PKR-171_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8723
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
53204
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0517GAWB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 171)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6529SVIV
yaml
seqspec
seqspec of IGVFFI0561XZDW, IGVFFI7754XGZO, IGVFFI5654FFRF
Jason Buenrostro, Broad
1.3 KB
validated