IGVFFI0554ISSS

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7634FZRU(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X035_G3_P036_L004_R1

md5sum

6758ca27554cd2e758baf1afb842e85d

Content MD5sum

d4821a9be6ea58da94041ee676966b9e

File Size

14 GB

Submitted File Name

Multiome_RNA_X035_G3_L003_P036_S49_L004_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H2WFTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

101

Read Count

213274141

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7229GVNA

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) substantia nigra tissue; Homo sapiens (female, 84 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples