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IGVFFI0551RQPI

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9809VXKU(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X041_G3_P041_L004_R1
md5sum
322e3289061d65d1b31b44fc1d1ddac1
Content MD5sum
25b57384e53779fe0c7536417a073764
File Size
1.4 GB
Submitted File Name
Multiome_ATAC_X041_G3_L003_P041_S13_L004_R1_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
223JJTLT3
Lane
4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
51
Read Count
44775334

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 72 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; Homo sapiens (female, 82 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF