Home

IGVFFI0536LOHR

released
validated
File Set
IGVFDS7533FCII(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 5
File Format
fastq
Content Type
reads
md5sum
0d86fc00bda1f7dd140bb7cbc64a3db9
Content MD5sum
e98cc16b17b0cf0fc0f7f12663b83e6d
File Size
13 GB
Submitted File Name
igvf_007/nova2/igvf_007_B02_D_nova_N2_L001_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5
Flowcell ID
HWHTCDSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
185195527

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 254 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.9 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0536LOHR, IGVFFI6304KHAD
Ali Mortazavi, UCI
1.4 KB
validated