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IGVFFI0523QZPA

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9590YCER(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 476
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX6-SC1_snATAC_S4_R3
md5sum
ce18d3eb3aad771edbc5418491486b5c
Content MD5sum
6a9ada6d9131c826259ed9072ae51886
File Size
11 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX6-SC1/BH2VM7DSX3/XHLT1-POOL-XX6-SC1-ATAC_S5_L004_R3_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
476
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
90
Read Count
230615187

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 30.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 18.0 years) peripheral blood mononuclear cell; ... and 17 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF