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SequenceFile
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IGVFFI0523QZPA
IGVFFI0523QZPA
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validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9590YCER
(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 476
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX6-SC1_snATAC_S4_R3
md5sum
ce18d3eb3aad771edbc5418491486b5c
Content MD5sum
6a9ada6d9131c826259ed9072ae51886
File Size
11 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX6-SC1/BH2VM7DSX3/XHLT1-POOL-XX6-SC1-ATAC_S5_L004_R3_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
476
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
90
Read Count
230615187
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM2228XCXF
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 30.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 18.0 years) peripheral blood mononuclear cell; ... and 17 more samples