Home

IGVFFI0521UKEP

released
validated
File Set
IGVFDS2004SFUP(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
md5sum
6088c71695930e32f415236d977c492c
Content MD5sum
402d46b469a812cb473d57cb0b2bce0a
File Size
14 GB
Submitted File Name
igvf_010/nova2/igvf_010_B06_D_nova_N2_L002_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Flowcell ID
H7YTNDSX7
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
189381700

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0521UKEP, IGVFFI3317POMZ
Ali Mortazavi, UCI
1.4 KB
validated