Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI0521FLZO
IGVFFI0521FLZO
released
validated
Json view
File Set
IGVFDS5438ZZYN
(reporter library targeting random selections genome-wide)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P019-R1
md5sum
ab7bf5e10d448a3abefda75891b2a21a
Content MD5sum
051350d01e0f32a108caf2c9e942d113
File Size
6.0 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool19.R1.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKVM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R1
Average Read Length
301
Read Count
42184297
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8521RJCQ
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
6.6 GB
validated
IGVFFI9383VIBN
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
6.3 GB
validated