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SequenceFile
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IGVFFI0498WAMD
IGVFFI0498WAMD
released
validated
Json view
File Set
IGVFDS3777TUPG
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3989
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3989_R1
md5sum
ba3b5e2058ca1f723397a17417349072
Content MD5sum
8ed77366e4819f3a63fac928781c9beb
File Size
719 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-713_L7_SS-PKR-206_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3989
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
13029996
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8717QNQV
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 206)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3127WENG
yaml
seqspec
seqspec of IGVFFI0498WAMD, IGVFFI0919XMMS, IGVFFI4947AAUB
Jason Buenrostro, Broad
1.4 KB
validated