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INDEXED
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SequenceFile
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IGVFFI0488VLFG
IGVFFI0488VLFG
released
validated
Json view
File Set
IGVFDS3694PHQU
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4080
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4080_R1
md5sum
464b8edbbc780c00ee50a3c7208937ae
Content MD5sum
75f5e70c027d94d049def4f0dff5e1fa
File Size
570 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-742_L3_SS-PKR-205_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4080
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
10153729
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0356QINW
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 205)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5640ATUG
yaml
seqspec
seqspec of IGVFFI0488VLFG, IGVFFI3616PUIL, IGVFFI8790EEGG
Jason Buenrostro, Broad
1.3 KB
validated