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IGVFFI0458UOKL
IGVFFI0458UOKL
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0262BREE
(CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
gary-hon:LW261_1_R2
md5sum
461a4eca5dbf84064d18b06e4f43ed90
Content MD5sum
2cf92e835fa28bb2f53122a5b96794b2
File Size
4.5 GB
Submitted File Name
/project/GCRB/Hon_lab/shared/data/sequencing_data/2023/2023-07-13-McDermott-NextSeq.10X.run3.transcriptome/2023-07-13/outs/fastq_path/AAC5GH5HV/LW261_S1_L001_R2_001.fastq.gz
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AAC5GH5HV
Lane
1
Illumina Read Type
R2
Average Read Length
92
Read Count
89324337
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1972EKCJ
InVitroSystem
GM25256 (WTC-11)
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW261), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library
Attribution
Award
HG011996
Principal Investigator(s)
Bruce Posner
,
Gary Hon
,
William Kraus
,
Nikhil Munshi
,
Maria Chahrour
Contact P.I.
Gary Hon
Lab
Gary Hon, UT