IGVFFI0458QKDZ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8894MIXR(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X042_G6_P044_L005_R2

md5sum

a6d00a5527cc0ab603fce5a3bc6bce20

Content MD5sum

445fcea28a2f1c121619a8af33638710

File Size

2.8 GB

Submitted File Name

Multiome_RNA_X042_G6_L006_P044_S24_L005_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

222YMLLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

65536727

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1167MABH

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples