IGVFFI0455VJHX

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1909GMRJ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G1_P054_L008_R2

md5sum

04bd9b7977c2c3f68bae52d761a417e3

Content MD5sum

7a491f99be3e113143d49bb44493bad3

File Size

2.1 GB

Submitted File Name

Multiome_RNA_RP005_G1_L001_P054_S36_L008_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

49155916

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7341RHCE

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples