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INDEXED
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SequenceFile
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IGVFFI0451JYCD
IGVFFI0451JYCD
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3574WNAR
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_X052_G6_P072_L002_I2
md5sum
057a449755df4342af11a7e8b03fc7cc
Content MD5sum
ebef546f97d24013a04e6e4f96d12f09
File Size
1.1 GB
Submitted File Name
Multiome_RNA_X052_G6_L006_P072_S2_L002_I2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
2
Flowcell ID
19UBCA4LE
Lane
2
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
I2
Average Read Length
10
Read Count
168665442
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM0335XJKH
MultiplexedSample
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 70 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease; ... and 8 more samples