IGVFFI0436QXAS

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3071BBZO(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP014_G2_P062_L007_R1

md5sum

3f64b0dbec4efbc3516cc53ed5c225e4

Content MD5sum

e7cf594eec2588149e0b374fb6f29b6f

File Size

941 MB

Submitted File Name

Multiome_RNA_RP014_G2_L002_P062_S30_L007_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

47906049

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7335HESV

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples