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INDEXED
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SequenceFile
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IGVFFI0436NJFH
IGVFFI0436NJFH
released
validated
Json view
File Set
IGVFDS6011QOLR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9183
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9183_R1
md5sum
85c2454969286ae8745670476fb95ddf
Content MD5sum
d2b53e593aa3f8a338d0f699922fe527
File Size
650 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2341_L8_SS-PKR-206_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9183
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
14274571
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1772WCQE
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 206)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7767BEIY
yaml
seqspec
seqspec of IGVFFI0436NJFH, IGVFFI6401XOUK, IGVFFI2628ZUZA
Jason Buenrostro, Broad
1.3 KB
validated