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SequenceFile
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IGVFFI0430WRIL
IGVFFI0430WRIL
released
validated
Json view
File Set
IGVFDS0046XBVO
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9184
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9184_R1
md5sum
3efb8ef9f61319f088315f4438d022e6
Content MD5sum
f27e68f199c864e40a1d1cb02089f1f2
File Size
699 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2342_L8_SS-PKR-206_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9184
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
15403557
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8717QNQV
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 206)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5862VTDR
yaml
seqspec
seqspec of IGVFFI0430WRIL, IGVFFI6264UUVO, IGVFFI4831BAEJ
Jason Buenrostro, Broad
1.3 KB
validated