IGVFFI0425AAAT

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3944MZOB(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X053_G6_P072_L008_R2

md5sum

cff5e219b9e41d72341367d7a3947280

Content MD5sum

57300fd72ed320a29f438bf6bfad27a3

File Size

8.7 GB

Submitted File Name

Multiome_RNA_X053_G6_L006_P072_S70_L008_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

127902757

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4211SBYX

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 73 years) middle temporal gyrus tissue; ... and 8 more samples