{
"@context": "/terms/",
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"File",
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],
"accession": "IGVFFI0418JNHY",
"aliases": [
"jesse-engreitz:230423pPPIFEnformer-Jurkat-Amp_PPIF_promoter-BioRep1-FFrep2-BinA-PCRrep6_R2"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI0418JNHY](/sequence-files/IGVFFI0418JNHY/) has in progress subobject auxiliary set [IGVFDS9285PZZW](/auxiliary-sets/IGVFDS9285PZZW/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI0418JNHY/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "9dab1de3d0601af5b3e2e9337b04f390",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-13T10:45:03.031228+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS9285PZZW/",
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"gene_list_for": [],
"href": "/sequence-files/IGVFFI0418JNHY/@@download/IGVFFI0418JNHY.fastq.gz",
"illumina_read_type": "R2",
"index": "TCTCGGTC:CAGT",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
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"maximum_read_length": 150,
"md5sum": "58fef128f1979d4f9311ad3b59f7d8bc",
"mean_read_length": 150,
"minimum_read_length": 150,
"read_count": 240412,
"release_timestamp": "2023-12-21T00:54:42.320483+00:00",
"s3_uri": "s3://igvf-files/2023/12/13/45b6b391-1a81-4593-8066-145172091cf1/IGVFFI0418JNHY.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
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"status": "released",
"submitted_by": {
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},
"submitted_file_name": "230423pPPIFEnformerJurkat-Jurkat-PE-pPPIF_Enformer-Amp-pPPIF-BioRep1-FFRep2_BinA-PCRrep6_S54_R2_001.fastq.gz",
"summary": "R2 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "45b6b391-1a81-4593-8066-145172091cf1"
}